Claude Code, Skill
Protein Design Skills
Protein Design Skills, a skill listed in the PlugVet directory.
Compatibility: Not stated.
Grade C
One Medium finding. Read the findings before installing.
Not a guarantee. A hygiene check of the source at the commit shown, not a security audit.
Rescanned at commit 59dd63374314, unchanged since the check below.
PERMISSION_SHELL_UNDECLARED
Why this grade
- PERMISSION_SHELL_UNDECLARED Medium
Runs shell commands that the manifest or description does not mention.
skills/foldseek/SKILL.md, line 60
subprocess.run([
Any High, or two or more Medium findings, give D. One Medium gives C. Low findings or a security Note give B. Each code names a finding behind the letter.
Grades are a hygiene check of the source at the commit shown, on the date checked, not a security audit or a guarantee. The free directory grades are automated. Before release, a PlugVet engineer reviews every paid report and any grade we hold back, including all F grades, against the source code and the evidence we quote.
What was checked
Plain notes from the hygiene checks.
Permissions
Concern
requests shell access. No manifest field names shell or command execution.
PERMISSION_SHELL_UNDECLARED
skills/foldseek/SKILL.md, line 60
subprocess.run([
skills/ipsae/SKILL.md, line 156
subprocess.run([
Install and update
Pass
No install-time script found, and dependencies are pinned or absent.
Network
Concern
can reach files.rcsb.org. The description does not name that host. can reach search.foldseek.com. The description does not name that host. can reach a host that is not written as a fixed address. can reach alphafold.ebi.ac.uk. The description does not name that host. can reach files.ipd.uw.edu. The description does not name that host. can reach rest.uniprot.org. The description does not name that host.
NETWORK_NO_FIXED_HOST NETWORK_UNNAMED_HOST
skills/campaign-manager/SKILL.md, line 51
curl -o target.pdb "https://files.rcsb.org/download/{PDB_ID}.pdb"
skills/foldseek/SKILL.md, line 35
curl -X POST "https://search.foldseek.com/api/ticket" \
skills/pdb/SKILL.md, line 27
curl -o 1alu.pdb "https://files.rcsb.org/download/1ALU.pdb"
Show more
skills/pdb/SKILL.md, line 30
curl -o 1alu.cif "https://files.rcsb.org/download/1ALU.cif"
skills/pdb/SKILL.md, line 48
response = requests.get(url)
skills/pdb/SKILL.md, line 55
return requests.get(url).text
skills/pdb/SKILL.md, line 129
response = requests.post(
skills/protein-design-workflow/SKILL.md, line 41
curl -o target.pdb "https://files.rcsb.org/download/XXXX.pdb"
Secrets
Concern
reads a credential or environment file.
SECRETS_PATH_UNCONFIRMED
.gitignore, line 15
*$py.class
Agent instructions
Pass
No instruction to ignore earlier instructions or to hide a step.
Obfuscation
Pass
No encoded or minified payload found.
Licence
Pass
A licence file is present (LICENSE).
Maintainer activity
Pass
The latest commit is within the last 365 days.
Note
Hygiene check of commit 59dd63374314. requests shell access. No manifest field names shell or command execution. can reach files.rcsb.org. The description does not name that host. can reach search.foldseek.com. The description does not name that host. can reach a host that is not written as a fixed address. can reach alphafold.ebi.ac.uk. The description does not name that host. can reach files.ipd.uw.edu. The description does not name that host. can reach rest.uniprot.org. The description does not name that host. reads a credential or environment file.
Date and source
Date checked:
github.com
Commit graded: 59dd63374314baa2fb1f9864f190775bd7466647
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